BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005E11SP1|AL425394
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1939 0.0
>3x_Contig1804
Length = 51183
Score = 1939 bits (974), Expect = 0.0
Identities = 987/994 (99%), Gaps = 1/994 (0%)
Strand = Plus / Plus
Query: 1 atcctttgttagttgaacgtcgaattctacatatgaagcacccaaagaagcagcagcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2427 atcctttgttagttgaacgtcgaattctacatatgaagcacccaaagaagcagcagcaat 2486
Query: 61 gaacgactccactgtgttttctcccaattggagagaattcttggtgttaaaattcttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2487 gaacgactccactgtgttttctcccaattggagagaattcttggtgttaaaattcttacc 2546
Query: 121 aagaccacgatgcccaataacacgagtggaaaccaatgatttccaatacttttcgcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2547 aagaccacgatgcccaataacacgagtggaaaccaatgatttccaatacttttcgcttct 2606
Query: 181 agctaagcccatatggggattctcaaagggtgtgacgttcatgaattcgaagttaactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2607 agctaagcccatatggggattctcaaagggtgtgacgttcatgaattcgaagttaactgt 2666
Query: 241 tcctagaacatcaagattttcaacgcctagaattggaaccgtaatagtttcgtataaggr 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2667 tcctagaacatcaagattttcaacgcctagaattggaaccgtaatagtttcgtataagga 2726
Query: 301 acgcattttacttccaacagaagtcaaagctgtatcaagtaaggcaacagctctccccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2727 acgcattttacttccaacagaagtcaaagctgtatcaagtaaggcaacagctctccccaa 2786
Query: 361 aatctttggcttttcgggagataagaagttgttaccagcgtgtggcgggttgctataagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2787 aatctttggcttttcgggagataagaagttgttaccagcgtgtggcgggttgctataagc 2846
Query: 421 atgtracatggagattggactcatcgaggttgggtaaccaggaaagctggaatgctcacg 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2847 atgtaacatggagattggactcatcgaggttgggtaaccaggaaagctggaatgctcacg 2906
Query: 481 atactgctggtgctcccggccacggttgttatgagcagctttgtcagagctcaattcagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2907 atactgctggtgctcccggccacggttgttatgagcagctttgtcagagctcaattcagt 2966
Query: 541 atttgcattgggagaaaccgacctactactgctggtgtatccataagttggcacaatatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2967 atttgcattgggagaaaccgacctactactgctggtgtatccataagttggcacaatatc 3026
Query: 601 gaagatgattttatgtgatgagtctggtttgtatggcactttaaaactgattgagtctga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3027 gaagatgattttatgtgatgagtctggtttgtatggcactttaaaactgattgagtctga 3086
Query: 661 attagaatcgaaaggtaaatcaagcacaaagctctcttcggaaagtgtgtctgggcaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3087 attagaatcgaaaggtaaatcaagcacaaagctctcttcggaaagtgtgtctgggcaact 3146
Query: 721 tatgactaatgaaagggcggtatctagttcagtagacgacactttgctaactggaacttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3147 tatgactaatgaaagggcggtatctagttcagtagacgacactttgctaactggaacttt 3206
Query: 781 gtttaatttcacagctggttttgtcgatctggtatcgttgccacctaagcatattawwat 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3207 gtttaatttcacagctggttttgtcgatctggtatcgttgccacctaagcatattaaaat 3266
Query: 841 watggattcattagattttaaatagctgtgtccgaactttttcaccgtttcggattcctg 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3267 aatggattcattagattttaaatagctgtgtccgaactttttcaccgtttcggattcctg 3326
Query: 901 ctgggagctatccttagaggagatagctttcccggtacttaatgaatgtgtt-acatttt 959
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3327 ctgggagctatccttagaggagatagctttcccggtacttaatgaatgtgttaacatttt 3386
Query: 960 cctaggattcgtaacaggttttccatcaktcatt 993
|||||||||||||||||||||||||||| |||||
Sbjct: 3387 cctaggattcgtaacaggttttccatcagtcatt 3420
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5860
Number of Sequences: 1807
Number of extensions: 5860
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)